Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.72■□□□□ 0.91
COL15A1P39059 AC020765.3-201ENST00000613051 740 ntBASIC20.72■□□□□ 0.91
COL15A1P39059 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL15A1P39059 AC022211.2-201ENST00000585075 2527 ntBASIC20.71■□□□□ 0.91
COL15A1P39059 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL15A1P39059 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
COL15A1P39059 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL15A1P39059 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COL15A1P39059 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL15A1P39059 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.71■□□□□ 0.91
COL15A1P39059 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL15A1P39059 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL15A1P39059 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COL15A1P39059 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.71■□□□□ 0.91
COL15A1P39059 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL15A1P39059 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.71■□□□□ 0.91
COL15A1P39059 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL15A1P39059 SDHAP3-202ENST00000515467 728 ntBASIC20.71■□□□□ 0.91
COL15A1P39059 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.71■□□□□ 0.91
COL15A1P39059 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COL15A1P39059 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
COL15A1P39059 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
COL15A1P39059 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.71■□□□□ 0.91
COL15A1P39059 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL15A1P39059 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.71■□□□□ 0.91
COL15A1P39059 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.71■□□□□ 0.91
COL15A1P39059 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.71■□□□□ 0.91
COL15A1P39059 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
COL15A1P39059 AL031731.1-201ENST00000642131 2094 ntBASIC20.71■□□□□ 0.91
COL15A1P39059 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL15A1P39059 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.7■□□□□ 0.9
COL15A1P39059 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.7■□□□□ 0.9
COL15A1P39059 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.7■□□□□ 0.9
COL15A1P39059 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.7■□□□□ 0.9
COL15A1P39059 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COL15A1P39059 GPAA1P2-202ENST00000606848 1787 ntBASIC20.7■□□□□ 0.9
COL15A1P39059 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL15A1P39059 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
COL15A1P39059 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.7■□□□□ 0.9
COL15A1P39059 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.7■□□□□ 0.9
COL15A1P39059 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
COL15A1P39059 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COL15A1P39059 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.7■□□□□ 0.9
COL15A1P39059 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.7■□□□□ 0.9
COL15A1P39059 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.7■□□□□ 0.9
COL15A1P39059 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 RPS2P32-201ENST00000439199 892 ntBASIC20.7■□□□□ 0.9
COL15A1P39059 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL15A1P39059 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.7■□□□□ 0.9
COL15A1P39059 RAB43P1-201ENST00000561790 589 ntBASIC20.7■□□□□ 0.9
COL15A1P39059 CTBP2P3-201ENST00000585629 1255 ntBASIC20.7■□□□□ 0.9
COL15A1P39059 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.7■□□□□ 0.9
COL15A1P39059 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL15A1P39059 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COL15A1P39059 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.69■□□□□ 0.9
COL15A1P39059 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COL15A1P39059 MIR658-201ENST00000385210 100 ntBASIC20.69■□□□□ 0.9
COL15A1P39059 AC098850.1-201ENST00000419919 790 ntBASIC20.69■□□□□ 0.9
COL15A1P39059 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.69■□□□□ 0.9
COL15A1P39059 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.69■□□□□ 0.9
COL15A1P39059 MYCLP2-201ENST00000449268 967 ntBASIC20.69■□□□□ 0.9
COL15A1P39059 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 AC123567.1-201ENST00000548294 1261 ntBASIC20.69■□□□□ 0.9
COL15A1P39059 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COL15A1P39059 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.69■□□□□ 0.9
COL15A1P39059 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
COL15A1P39059 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.69■□□□□ 0.9
COL15A1P39059 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.69■□□□□ 0.9
COL15A1P39059 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.69■□□□□ 0.9
COL15A1P39059 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COL15A1P39059 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL15A1P39059 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
COL15A1P39059 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COL15A1P39059 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms