Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RAB3BP20337 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB3BP20337 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB3BP20337 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 AC243591.1-201ENST00000452967 1364 ntBASIC14.54□□□□□ -0.08
RAB3BP20337 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.54□□□□□ -0.08
RAB3BP20337 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB3BP20337 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB3BP20337 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3BP20337 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB3BP20337 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB3BP20337 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RAB3BP20337 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB3BP20337 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3BP20337 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 PPT1-215ENST00000641471 2368 ntBASIC14.53□□□□□ -0.08
RAB3BP20337 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3BP20337 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 PMPCAP1-201ENST00000508114 1576 ntBASIC14.53□□□□□ -0.08
RAB3BP20337 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3BP20337 AC117947.1-201ENST00000427448 529 ntBASIC14.53□□□□□ -0.08
RAB3BP20337 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB3BP20337 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3BP20337 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RAB3BP20337 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB3BP20337 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3BP20337 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3BP20337 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
RAB3BP20337 PCGF3-213ENST00000620529 1899 ntBASIC14.52□□□□□ -0.08
RAB3BP20337 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB3BP20337 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RAB3BP20337 MIR600HG-201ENST00000449175 5984 ntBASIC14.52□□□□□ -0.08
RAB3BP20337 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
RAB3BP20337 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RAB3BP20337 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RAB3BP20337 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3BP20337 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB3BP20337 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB3BP20337 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 TSPY5P-201ENST00000426936 936 ntBASIC14.52□□□□□ -0.09
RAB3BP20337 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB3BP20337 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB3BP20337 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB3BP20337 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB3BP20337 TERC-201ENST00000602385 541 ntBASIC14.52□□□□□ -0.09
RAB3BP20337 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RAB3BP20337 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB3BP20337 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms