Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.4■□□□□ 0.7
TOP1P11387 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.4■□□□□ 0.7
TOP1P11387 AC006538.1-201ENST00000567905 1585 ntBASIC19.4■□□□□ 0.7
TOP1P11387 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.4■□□□□ 0.7
TOP1P11387 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
TOP1P11387 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TOP1P11387 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.39■□□□□ 0.7
TOP1P11387 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.7
TOP1P11387 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TOP1P11387 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TOP1P11387 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
TOP1P11387 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.7
TOP1P11387 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.39■□□□□ 0.69
TOP1P11387 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.39■□□□□ 0.69
TOP1P11387 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.39■□□□□ 0.69
TOP1P11387 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.39■□□□□ 0.69
TOP1P11387 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.39■□□□□ 0.69
TOP1P11387 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 UXT-AS1-201ENST00000590504 1525 ntBASIC19.39■□□□□ 0.69
TOP1P11387 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TOP1P11387 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.39■□□□□ 0.69
TOP1P11387 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
TOP1P11387 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TOP1P11387 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TOP1P11387 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TOP1P11387 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TOP1P11387 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 MIR346-201ENST00000362234 95 ntBASIC19.38■□□□□ 0.69
TOP1P11387 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.38■□□□□ 0.69
TOP1P11387 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.38■□□□□ 0.69
TOP1P11387 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.38■□□□□ 0.69
TOP1P11387 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.38■□□□□ 0.69
TOP1P11387 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.38■□□□□ 0.69
TOP1P11387 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.38■□□□□ 0.69
TOP1P11387 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
TOP1P11387 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TOP1P11387 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
TOP1P11387 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.38■□□□□ 0.69
TOP1P11387 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.38■□□□□ 0.69
TOP1P11387 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
TOP1P11387 AP000842.3-202ENST00000569238 1080 ntBASIC19.38■□□□□ 0.69
TOP1P11387 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.38■□□□□ 0.69
TOP1P11387 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.38■□□□□ 0.69
TOP1P11387 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
TOP1P11387 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TOP1P11387 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.37■□□□□ 0.69
TOP1P11387 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TOP1P11387 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TOP1P11387 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 AC078925.2-201ENST00000624013 1973 ntBASIC19.37■□□□□ 0.69
TOP1P11387 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TOP1P11387 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TOP1P11387 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TOP1P11387 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms