Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PDGFAP04085 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.51■□□□□ 0.07
PDGFAP04085 GAPDHP21-201ENST00000450301 1010 ntBASIC15.51■□□□□ 0.07
PDGFAP04085 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.51■□□□□ 0.07
PDGFAP04085 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.51■□□□□ 0.07
PDGFAP04085 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
PDGFAP04085 KRT8P23-201ENST00000560090 1207 ntBASIC15.51■□□□□ 0.07
PDGFAP04085 AC005412.3-201ENST00000580309 715 ntBASIC15.51■□□□□ 0.07
PDGFAP04085 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 AL158211.3-201ENST00000607385 239 ntBASIC15.51■□□□□ 0.07
PDGFAP04085 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.51■□□□□ 0.07
PDGFAP04085 MIR6080-201ENST00000617359 66 ntBASIC15.51■□□□□ 0.07
PDGFAP04085 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 AC012569.1-201ENST00000591191 1524 ntBASIC15.51■□□□□ 0.07
PDGFAP04085 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PDGFAP04085 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDGFAP04085 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.51■□□□□ 0.07
PDGFAP04085 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PDGFAP04085 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PDGFAP04085 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
PDGFAP04085 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PDGFAP04085 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PDGFAP04085 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.5■□□□□ 0.07
PDGFAP04085 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.5■□□□□ 0.07
PDGFAP04085 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PDGFAP04085 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.5■□□□□ 0.07
PDGFAP04085 SPDYE7P-202ENST00000420373 878 ntBASIC15.5■□□□□ 0.07
PDGFAP04085 AC092580.3-201ENST00000430932 139 ntBASIC15.5■□□□□ 0.07
PDGFAP04085 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.5■□□□□ 0.07
PDGFAP04085 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.5■□□□□ 0.07
PDGFAP04085 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.5■□□□□ 0.07
PDGFAP04085 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PDGFAP04085 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.5■□□□□ 0.07
PDGFAP04085 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.5■□□□□ 0.07
PDGFAP04085 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.5■□□□□ 0.07
PDGFAP04085 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.5■□□□□ 0.07
PDGFAP04085 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.5■□□□□ 0.07
PDGFAP04085 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.5■□□□□ 0.07
PDGFAP04085 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PDGFAP04085 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PDGFAP04085 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDGFAP04085 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PDGFAP04085 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PDGFAP04085 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
PDGFAP04085 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.49■□□□□ 0.07
PDGFAP04085 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.49■□□□□ 0.07
PDGFAP04085 LYSMD4-203ENST00000378904 2122 ntBASIC15.49■□□□□ 0.07
PDGFAP04085 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.49■□□□□ 0.07
PDGFAP04085 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.49■□□□□ 0.07
PDGFAP04085 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
PDGFAP04085 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDGFAP04085 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.49■□□□□ 0.07
PDGFAP04085 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
PDGFAP04085 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.49■□□□□ 0.07
PDGFAP04085 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms