Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.12□□□□□ -0.31
IFNA1P01562 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
IFNA1P01562 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
IFNA1P01562 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.12□□□□□ -0.31
IFNA1P01562 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.12□□□□□ -0.31
IFNA1P01562 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 RNA5SP413-201ENST00000516373 109 ntBASIC13.12□□□□□ -0.31
IFNA1P01562 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.12□□□□□ -0.31
IFNA1P01562 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.12□□□□□ -0.31
IFNA1P01562 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.12□□□□□ -0.31
IFNA1P01562 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.12□□□□□ -0.31
IFNA1P01562 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.12□□□□□ -0.31
IFNA1P01562 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.12□□□□□ -0.31
IFNA1P01562 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.12□□□□□ -0.31
IFNA1P01562 TCAF2P1-201ENST00000291129 2421 ntBASIC13.12□□□□□ -0.31
IFNA1P01562 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.12□□□□□ -0.31
IFNA1P01562 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.12□□□□□ -0.31
IFNA1P01562 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.12□□□□□ -0.31
IFNA1P01562 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
IFNA1P01562 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.12□□□□□ -0.31
IFNA1P01562 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.12□□□□□ -0.31
IFNA1P01562 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IFNA1P01562 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
IFNA1P01562 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 AC010460.3-201ENST00000511359 1579 ntBASIC13.11□□□□□ -0.31
IFNA1P01562 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.11□□□□□ -0.31
IFNA1P01562 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
IFNA1P01562 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.11□□□□□ -0.31
IFNA1P01562 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
IFNA1P01562 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 AC026396.1-201ENST00000419388 421 ntBASIC13.11□□□□□ -0.31
IFNA1P01562 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
IFNA1P01562 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.11□□□□□ -0.31
IFNA1P01562 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.11□□□□□ -0.31
IFNA1P01562 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
IFNA1P01562 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.11□□□□□ -0.31
IFNA1P01562 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.11□□□□□ -0.31
IFNA1P01562 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
IFNA1P01562 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
IFNA1P01562 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.11□□□□□ -0.31
IFNA1P01562 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.11□□□□□ -0.31
IFNA1P01562 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.11□□□□□ -0.31
IFNA1P01562 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.11□□□□□ -0.31
IFNA1P01562 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.11□□□□□ -0.31
IFNA1P01562 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.11□□□□□ -0.31
IFNA1P01562 AC006486.2-201ENST00000624246 2199 ntBASIC13.11□□□□□ -0.31
IFNA1P01562 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.11□□□□□ -0.31
IFNA1P01562 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.11□□□□□ -0.31
IFNA1P01562 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
IFNA1P01562 AC112504.1-201ENST00000623415 1841 ntBASIC13.11□□□□□ -0.31
IFNA1P01562 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IFNA1P01562 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.11□□□□□ -0.31
IFNA1P01562 GRK6P1-201ENST00000400595 1711 ntBASIC13.1□□□□□ -0.31
IFNA1P01562 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.1□□□□□ -0.31
IFNA1P01562 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.1□□□□□ -0.31
IFNA1P01562 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
IFNA1P01562 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
IFNA1P01562 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms