Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC3O15379 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC3O15379 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
HDAC3O15379 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.12■□□□□ 0.17
HDAC3O15379 NUS1P2-201ENST00000417358 873 ntBASIC16.12■□□□□ 0.17
HDAC3O15379 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.12■□□□□ 0.17
HDAC3O15379 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.12■□□□□ 0.17
HDAC3O15379 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.12■□□□□ 0.17
HDAC3O15379 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC3O15379 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.12■□□□□ 0.17
HDAC3O15379 MIR3180-1-201ENST00000580374 94 ntBASIC16.12■□□□□ 0.17
HDAC3O15379 MIR3180-3-201ENST00000584616 94 ntBASIC16.12■□□□□ 0.17
HDAC3O15379 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.12■□□□□ 0.17
HDAC3O15379 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC3O15379 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.12■□□□□ 0.17
HDAC3O15379 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HDAC3O15379 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC3O15379 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC3O15379 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.12■□□□□ 0.17
HDAC3O15379 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC3O15379 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.12■□□□□ 0.17
HDAC3O15379 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC3O15379 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC3O15379 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.12■□□□□ 0.17
HDAC3O15379 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.12■□□□□ 0.17
HDAC3O15379 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.12■□□□□ 0.17
HDAC3O15379 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.12■□□□□ 0.17
HDAC3O15379 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC3O15379 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
HDAC3O15379 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC3O15379 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC3O15379 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.11■□□□□ 0.17
HDAC3O15379 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.11■□□□□ 0.17
HDAC3O15379 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HDAC3O15379 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.11■□□□□ 0.17
HDAC3O15379 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
HDAC3O15379 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HDAC3O15379 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HDAC3O15379 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HDAC3O15379 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.11■□□□□ 0.17
HDAC3O15379 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
HDAC3O15379 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.11■□□□□ 0.17
HDAC3O15379 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.11■□□□□ 0.17
HDAC3O15379 PMS2P1-201ENST00000431037 1228 ntBASIC16.11■□□□□ 0.17
HDAC3O15379 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.11■□□□□ 0.17
HDAC3O15379 AC106795.1-205ENST00000512851 1056 ntBASIC16.11■□□□□ 0.17
HDAC3O15379 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.11■□□□□ 0.17
HDAC3O15379 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.11■□□□□ 0.17
HDAC3O15379 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HDAC3O15379 AC020765.3-201ENST00000613051 740 ntBASIC16.11■□□□□ 0.17
HDAC3O15379 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HDAC3O15379 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 AC013268.4-201ENST00000637413 2228 ntBASIC16.11■□□□□ 0.17
HDAC3O15379 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.11■□□□□ 0.17
HDAC3O15379 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.11■□□□□ 0.17
HDAC3O15379 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDAC3O15379 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC3O15379 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC3O15379 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
HDAC3O15379 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC3O15379 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC3O15379 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HDAC3O15379 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC3O15379 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.1■□□□□ 0.17
HDAC3O15379 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC3O15379 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.1■□□□□ 0.17
HDAC3O15379 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HDAC3O15379 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HDAC3O15379 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC3O15379 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.1■□□□□ 0.17
HDAC3O15379 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HDAC3O15379 PCED1CP-201ENST00000419887 785 ntBASIC16.1■□□□□ 0.17
HDAC3O15379 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.1■□□□□ 0.17
HDAC3O15379 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC3O15379 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
HDAC3O15379 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HDAC3O15379 AL139288.1-201ENST00000623748 933 ntBASIC16.1■□□□□ 0.17
HDAC3O15379 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.1■□□□□ 0.17
HDAC3O15379 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC3O15379 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC3O15379 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms