Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 AC107890.1-201ENST00000422478 521 ntBASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 RNA5SP410-201ENST00000516285 106 ntBASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 MIR4453-201ENST00000584019 89 ntBASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.67■□□□□ 0.42
UBQLN1Q9UMX0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 MIR770-201ENST00000390219 98 ntBASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 DUX4L27-201ENST00000554796 1261 ntBASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 AC140878.1-201ENST00000565277 250 ntBASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 AC003101.2-201ENST00000612557 442 ntBASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN1Q9UMX0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 AC005622.1-201ENST00000636801 1703 ntBASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 AL353705.2-201ENST00000428243 662 ntBASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 POU5F1P6-201ENST00000466990 990 ntBASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 AC024267.1-201ENST00000582320 895 ntBASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 AC007967.4-201ENST00000614700 386 ntBASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
UBQLN1Q9UMX0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms