Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 AC004790.1-201ENST00000612686 536 ntBASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 AC025048.6-201ENST00000634326 1161 ntBASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FBXO28Q9NVF7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 AC063926.2-201ENST00000623766 1308 ntBASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FBXO28Q9NVF7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 GNAQP1-201ENST00000444815 1067 ntBASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 GAPDHP21-201ENST00000450301 1010 ntBASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 AC010336.2-201ENST00000564226 506 ntBASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 PCGF3-213ENST00000620529 1899 ntBASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
FBXO28Q9NVF7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FBXO28Q9NVF7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FBXO28Q9NVF7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.86■□□□□ 0.61
FBXO28Q9NVF7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.86■□□□□ 0.61
FBXO28Q9NVF7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms