Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.16■□□□□ 0.5
POLR3FQ9H1D9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3FQ9H1D9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3FQ9H1D9 AC020916.1-201ENST00000587762 1774 ntBASIC18.16■□□□□ 0.5
POLR3FQ9H1D9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3FQ9H1D9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.16■□□□□ 0.5
POLR3FQ9H1D9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR3FQ9H1D9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
POLR3FQ9H1D9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 RFPL4AP1-201ENST00000530883 850 ntBASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR3FQ9H1D9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 ALOX12P2-203ENST00000570921 1945 ntBASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 AP3S2-216ENST00000617003 1561 ntBASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 AC098859.1-201ENST00000502915 1238 ntBASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 AL512356.2-201ENST00000546955 174 ntBASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 RARRES2P9-201ENST00000565168 469 ntBASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 MIR6080-201ENST00000617359 66 ntBASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
POLR3FQ9H1D9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 AC005052.1-201ENST00000625181 2492 ntBASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 PRORSD1P-202ENST00000563365 2154 ntBASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 AC005622.1-201ENST00000636801 1703 ntBASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3FQ9H1D9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms