Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP4Q9BWG4 AC006058.4-201ENST00000624016 1670 ntBASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 AL441883.1-201ENST00000566170 1045 ntBASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 MIR4497-201ENST00000583208 89 ntBASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 OR2I1P-210ENST00000642037 4691 ntBASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 TUBB8P12-201ENST00000308911 1335 ntBASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 TUBB7P-202ENST00000428444 1305 ntBASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 TUBB8P7-204ENST00000567960 1332 ntBASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP4Q9BWG4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 COX11P1-201ENST00000489116 835 ntBASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 AC005332.3-201ENST00000589904 676 ntBASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 AL390719.2-201ENST00000606993 987 ntBASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 BNIP3P41-202ENST00000616656 861 ntBASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 AP006294.2-201ENST00000641667 209 ntBASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP4Q9BWG4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms