Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.02■□□□□ 0.16
SLC38A3Q99624 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC38A3Q99624 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.02■□□□□ 0.16
SLC38A3Q99624 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC38A3Q99624 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC38A3Q99624 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
SLC38A3Q99624 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
SLC38A3Q99624 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A3Q99624 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SLC38A3Q99624 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A3Q99624 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
SLC38A3Q99624 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A3Q99624 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A3Q99624 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SLC38A3Q99624 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A3Q99624 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A3Q99624 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A3Q99624 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A3Q99624 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 AC073439.1-201ENST00000624121 1774 ntBASIC16.01■□□□□ 0.15
SLC38A3Q99624 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 TREML5P-201ENST00000421694 576 ntBASIC16.01■□□□□ 0.15
SLC38A3Q99624 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 AC069120.2-201ENST00000524091 540 ntBASIC16.01■□□□□ 0.15
SLC38A3Q99624 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 RARRES2P9-201ENST00000565168 469 ntBASIC16.01■□□□□ 0.15
SLC38A3Q99624 MIR4453-201ENST00000584019 89 ntBASIC16.01■□□□□ 0.15
SLC38A3Q99624 AL390955.2-201ENST00000603032 514 ntBASIC16.01■□□□□ 0.15
SLC38A3Q99624 AC003101.2-201ENST00000612557 442 ntBASIC16.01■□□□□ 0.15
SLC38A3Q99624 AC018529.1-201ENST00000613063 361 ntBASIC16.01■□□□□ 0.15
SLC38A3Q99624 AL139011.1-202ENST00000642063 584 ntBASIC16.01■□□□□ 0.15
SLC38A3Q99624 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A3Q99624 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC38A3Q99624 FO538757.1-201ENST00000623083 1397 ntBASIC16■□□□□ 0.15
SLC38A3Q99624 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 AP3S2-216ENST00000617003 1561 ntBASIC16■□□□□ 0.15
SLC38A3Q99624 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC38A3Q99624 SNX33P1-201ENST00000592116 1762 ntBASIC16■□□□□ 0.15
SLC38A3Q99624 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
SLC38A3Q99624 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16■□□□□ 0.15
SLC38A3Q99624 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SLC38A3Q99624 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16■□□□□ 0.15
SLC38A3Q99624 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16■□□□□ 0.15
SLC38A3Q99624 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16■□□□□ 0.15
SLC38A3Q99624 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16■□□□□ 0.15
SLC38A3Q99624 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16■□□□□ 0.15
SLC38A3Q99624 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16■□□□□ 0.15
SLC38A3Q99624 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16■□□□□ 0.15
SLC38A3Q99624 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16■□□□□ 0.15
SLC38A3Q99624 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16■□□□□ 0.15
SLC38A3Q99624 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC38A3Q99624 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16■□□□□ 0.15
SLC38A3Q99624 AL645728.1-201ENST00000366221 2101 ntBASIC16■□□□□ 0.15
SLC38A3Q99624 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms