Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.12■□□□□ 0.33
HAPLN3Q96S86 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 PCDHA14-201ENST00000506751 2298 ntBASIC17.11■□□□□ 0.33
HAPLN3Q96S86 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 AL135744.1-201ENST00000565098 629 ntBASIC17.11■□□□□ 0.33
HAPLN3Q96S86 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 ME2P1-201ENST00000426028 1970 ntBASIC17.11■□□□□ 0.33
HAPLN3Q96S86 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HAPLN3Q96S86 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.1■□□□□ 0.33
HAPLN3Q96S86 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 AC243562.1-201ENST00000560672 389 ntBASIC17.1■□□□□ 0.33
HAPLN3Q96S86 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms