Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 AC079602.3-201ENST00000623931 403 ntBASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 AC097374.2-201ENST00000618617 1306 ntBASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 AC004817.3-201ENST00000602957 2129 ntBASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 AC005252.3-201ENST00000623855 2258 ntBASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 CYP2D8P-201ENST00000433633 1490 ntBASIC14.57□□□□□ -0.08
LYSMD2Q8IV50 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 GCSHP2-201ENST00000560971 527 ntBASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 FAM87A-204ENST00000613235 858 ntBASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD2Q8IV50 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 AC007686.3-201ENST00000619017 3487 ntBASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 KRT18P48-201ENST00000434763 852 ntBASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 GCSHP5-201ENST00000443090 522 ntBASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD2Q8IV50 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms