Protein–RNA interactions for Protein: Q7RTP0

NIPA1, Magnesium transporter NIPA1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA1Q7RTP0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPA1Q7RTP0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPA1Q7RTP0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 RNA5SP421-201ENST00000516864 134 ntBASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 AC092171.3-201ENST00000610122 2651 ntBASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NIPA1Q7RTP0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 ALOX12P2-203ENST00000570921 1945 ntBASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 SPCS2P1-201ENST00000561636 679 ntBASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 AL096865.1-201ENST00000606796 927 ntBASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 SPDYE12P-201ENST00000618416 771 ntBASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 NKILA-202ENST00000614771 2598 ntBASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
NIPA1Q7RTP0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NIPA1Q7RTP0 BASP1P1-201ENST00000430708 665 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms