Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CERKLQ49MI3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CERKLQ49MI3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CERKLQ49MI3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CERKLQ49MI3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CERKLQ49MI3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 PCGF3-213ENST00000620529 1899 ntBASIC19.24■□□□□ 0.67
CERKLQ49MI3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CERKLQ49MI3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 AC009407.1-201ENST00000568958 598 ntBASIC19.23■□□□□ 0.67
CERKLQ49MI3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 AC239800.4-201ENST00000603712 296 ntBASIC19.23■□□□□ 0.67
CERKLQ49MI3 AL844908.2-201ENST00000609461 460 ntBASIC19.23■□□□□ 0.67
CERKLQ49MI3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CERKLQ49MI3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CERKLQ49MI3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 AL080243.2-201ENST00000418783 582 ntBASIC19.22■□□□□ 0.67
CERKLQ49MI3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CERKLQ49MI3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CERKLQ49MI3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms