Protein–RNA interactions for Protein: Q494R4

CCDC153, Coiled-coil domain-containing protein 153, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC153Q494R4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC153Q494R4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC153Q494R4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC153Q494R4 PTCHD3P3-201ENST00000403073 906 ntBASIC16.41■□□□□ 0.22
CCDC153Q494R4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC153Q494R4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC153Q494R4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC153Q494R4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC153Q494R4 PMS2P1-201ENST00000431037 1228 ntBASIC16.41■□□□□ 0.22
CCDC153Q494R4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC153Q494R4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC153Q494R4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC153Q494R4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC153Q494R4 AC020765.3-201ENST00000613051 740 ntBASIC16.41■□□□□ 0.22
CCDC153Q494R4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC153Q494R4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC153Q494R4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC153Q494R4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC153Q494R4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC153Q494R4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC153Q494R4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC153Q494R4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC153Q494R4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC153Q494R4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC153Q494R4 LINC02447-202ENST00000501888 2146 ntBASIC16.4■□□□□ 0.22
CCDC153Q494R4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 KRT18P21-201ENST00000515767 1272 ntBASIC16.4■□□□□ 0.22
CCDC153Q494R4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 AC087641.1-201ENST00000557561 1021 ntBASIC16.4■□□□□ 0.22
CCDC153Q494R4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 AC092119.3-201ENST00000612618 583 ntBASIC16.4■□□□□ 0.22
CCDC153Q494R4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 TCAF2P1-201ENST00000291129 2421 ntBASIC16.4■□□□□ 0.22
CCDC153Q494R4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 AC112504.1-201ENST00000623415 1841 ntBASIC16.4■□□□□ 0.22
CCDC153Q494R4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC153Q494R4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC153Q494R4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.39■□□□□ 0.22
CCDC153Q494R4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC153Q494R4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC153Q494R4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC153Q494R4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 MIR648-201ENST00000385046 94 ntBASIC16.39■□□□□ 0.21
CCDC153Q494R4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC153Q494R4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC153Q494R4 SLC25A6P2-201ENST00000497974 877 ntBASIC16.39■□□□□ 0.21
CCDC153Q494R4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC153Q494R4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.39■□□□□ 0.21
CCDC153Q494R4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC153Q494R4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 AC126177.1-201ENST00000547829 2218 ntBASIC16.39■□□□□ 0.21
CCDC153Q494R4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC153Q494R4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
CCDC153Q494R4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC153Q494R4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CCDC153Q494R4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms