Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CASP9P55211 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CASP9P55211 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CASP9P55211 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.71■□□□□ 0.1
CASP9P55211 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CASP9P55211 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.71■□□□□ 0.1
CASP9P55211 AL031731.1-201ENST00000642131 2094 ntBASIC15.71■□□□□ 0.1
CASP9P55211 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
CASP9P55211 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CASP9P55211 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.71■□□□□ 0.1
CASP9P55211 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 AL162727.3-201ENST00000635661 2787 ntBASIC15.7■□□□□ 0.1
CASP9P55211 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CASP9P55211 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CASP9P55211 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.7■□□□□ 0.1
CASP9P55211 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CASP9P55211 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.7■□□□□ 0.1
CASP9P55211 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.7■□□□□ 0.1
CASP9P55211 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.7■□□□□ 0.1
CASP9P55211 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.7■□□□□ 0.1
CASP9P55211 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.7■□□□□ 0.1
CASP9P55211 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.7■□□□□ 0.1
CASP9P55211 RPS15P9-201ENST00000494093 319 ntBASIC15.7■□□□□ 0.1
CASP9P55211 OR7E14P-202ENST00000530490 1290 ntBASIC15.7■□□□□ 0.1
CASP9P55211 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CASP9P55211 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.7■□□□□ 0.1
CASP9P55211 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.7■□□□□ 0.1
CASP9P55211 TP73-AS1-207ENST00000624167 988 ntBASIC15.7■□□□□ 0.1
CASP9P55211 AC107918.4-202ENST00000641623 219 ntBASIC15.7■□□□□ 0.1
CASP9P55211 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CASP9P55211 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.7■□□□□ 0.1
CASP9P55211 AC131009.4-201ENST00000624048 1740 ntBASIC15.7■□□□□ 0.1
CASP9P55211 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.7■□□□□ 0.1
CASP9P55211 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.7■□□□□ 0.1
CASP9P55211 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CASP9P55211 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.7■□□□□ 0.1
CASP9P55211 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CASP9P55211 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP9P55211 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.69■□□□□ 0.1
CASP9P55211 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP9P55211 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CASP9P55211 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
CASP9P55211 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
CASP9P55211 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.69■□□□□ 0.1
CASP9P55211 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CASP9P55211 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CASP9P55211 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP9P55211 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CASP9P55211 LAGE3P1-201ENST00000425356 484 ntBASIC15.69■□□□□ 0.1
CASP9P55211 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP9P55211 RNPS1P1-201ENST00000507437 918 ntBASIC15.69■□□□□ 0.1
CASP9P55211 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP9P55211 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.69■□□□□ 0.1
CASP9P55211 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.69■□□□□ 0.1
CASP9P55211 MIR4492-201ENST00000581627 80 ntBASIC15.69■□□□□ 0.1
CASP9P55211 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP9P55211 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP9P55211 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CASP9P55211 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
CASP9P55211 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
CASP9P55211 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP9P55211 GGT3P-204ENST00000453783 1664 ntBASIC15.69■□□□□ 0.1
CASP9P55211 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP9P55211 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.69■□□□□ 0.1
CASP9P55211 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.69■□□□□ 0.1
CASP9P55211 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.69■□□□□ 0.1
CASP9P55211 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CASP9P55211 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASP9P55211 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms