Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PDE1AP54750 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.16■□□□□ 0.82
PDE1AP54750 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PDE1AP54750 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE1AP54750 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PDE1AP54750 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PDE1AP54750 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE1AP54750 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE1AP54750 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.16■□□□□ 0.82
PDE1AP54750 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE1AP54750 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PDE1AP54750 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE1AP54750 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE1AP54750 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
PDE1AP54750 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.16■□□□□ 0.82
PDE1AP54750 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE1AP54750 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE1AP54750 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE1AP54750 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE1AP54750 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE1AP54750 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE1AP54750 POLD2P1-201ENST00000511220 997 ntBASIC20.15■□□□□ 0.82
PDE1AP54750 KRT18P58-201ENST00000527480 1120 ntBASIC20.15■□□□□ 0.82
PDE1AP54750 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.15■□□□□ 0.82
PDE1AP54750 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE1AP54750 WASH6P-202ENST00000359512 1437 ntBASIC20.15■□□□□ 0.82
PDE1AP54750 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.15■□□□□ 0.82
PDE1AP54750 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.15■□□□□ 0.82
PDE1AP54750 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE1AP54750 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE1AP54750 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE1AP54750 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE1AP54750 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE1AP54750 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.15■□□□□ 0.82
PDE1AP54750 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PDE1AP54750 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PDE1AP54750 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PDE1AP54750 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.14■□□□□ 0.82
PDE1AP54750 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE1AP54750 AC073439.1-201ENST00000624121 1774 ntBASIC20.14■□□□□ 0.81
PDE1AP54750 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE1AP54750 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDE1AP54750 AC002056.1-201ENST00000395613 760 ntBASIC20.14■□□□□ 0.81
PDE1AP54750 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDE1AP54750 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.14■□□□□ 0.81
PDE1AP54750 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PDE1AP54750 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.14■□□□□ 0.81
PDE1AP54750 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.14■□□□□ 0.81
PDE1AP54750 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE1AP54750 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.14■□□□□ 0.81
PDE1AP54750 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDE1AP54750 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE1AP54750 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDE1AP54750 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.14■□□□□ 0.81
PDE1AP54750 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
PDE1AP54750 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PDE1AP54750 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.13■□□□□ 0.81
PDE1AP54750 AC024909.3-201ENST00000611513 2257 ntBASIC20.13■□□□□ 0.81
PDE1AP54750 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PDE1AP54750 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.13■□□□□ 0.81
PDE1AP54750 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.13■□□□□ 0.81
PDE1AP54750 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.13■□□□□ 0.81
PDE1AP54750 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PDE1AP54750 AL161645.1-201ENST00000622716 1255 ntBASIC20.13■□□□□ 0.81
PDE1AP54750 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.13■□□□□ 0.81
PDE1AP54750 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PDE1AP54750 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PDE1AP54750 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PDE1AP54750 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.13■□□□□ 0.81
PDE1AP54750 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.13■□□□□ 0.81
PDE1AP54750 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDE1AP54750 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PDE1AP54750 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
PDE1AP54750 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.13■□□□□ 0.81
PDE1AP54750 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 AL603832.2-201ENST00000566195 2125 ntBASIC20.12■□□□□ 0.81
PDE1AP54750 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDE1AP54750 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms