Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.24■□□□□ 0.03
ABCD3P28288 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ABCD3P28288 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.24■□□□□ 0.03
ABCD3P28288 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.24■□□□□ 0.03
ABCD3P28288 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.24■□□□□ 0.03
ABCD3P28288 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.24■□□□□ 0.03
ABCD3P28288 AP006288.1-201ENST00000446065 395 ntBASIC15.24■□□□□ 0.03
ABCD3P28288 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.24■□□□□ 0.03
ABCD3P28288 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.24■□□□□ 0.03
ABCD3P28288 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.24■□□□□ 0.03
ABCD3P28288 AC243562.1-201ENST00000560672 389 ntBASIC15.24■□□□□ 0.03
ABCD3P28288 AC105339.1-204ENST00000636249 355 ntBASIC15.24■□□□□ 0.03
ABCD3P28288 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ABCD3P28288 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ABCD3P28288 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.24■□□□□ 0.03
ABCD3P28288 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.24■□□□□ 0.03
ABCD3P28288 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
ABCD3P28288 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.24■□□□□ 0.03
ABCD3P28288 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.23■□□□□ 0.03
ABCD3P28288 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.23■□□□□ 0.03
ABCD3P28288 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.23■□□□□ 0.03
ABCD3P28288 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.23■□□□□ 0.03
ABCD3P28288 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.23■□□□□ 0.03
ABCD3P28288 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.23■□□□□ 0.03
ABCD3P28288 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ABCD3P28288 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.23■□□□□ 0.03
ABCD3P28288 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.23■□□□□ 0.03
ABCD3P28288 AC079140.1-201ENST00000508039 487 ntBASIC15.23■□□□□ 0.03
ABCD3P28288 AP000344.2-201ENST00000512987 629 ntBASIC15.23■□□□□ 0.03
ABCD3P28288 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.23■□□□□ 0.03
ABCD3P28288 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
ABCD3P28288 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.23■□□□□ 0.03
ABCD3P28288 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.23■□□□□ 0.03
ABCD3P28288 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.23■□□□□ 0.03
ABCD3P28288 AC022145.2-201ENST00000598203 171 ntBASIC15.23■□□□□ 0.03
ABCD3P28288 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.23■□□□□ 0.03
ABCD3P28288 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.23■□□□□ 0.03
ABCD3P28288 AC006538.3-201ENST00000612495 578 ntBASIC15.23■□□□□ 0.03
ABCD3P28288 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.23■□□□□ 0.03
ABCD3P28288 AL691403.2-201ENST00000618460 490 ntBASIC15.23■□□□□ 0.03
ABCD3P28288 AL513210.1-201ENST00000629608 234 ntBASIC15.23■□□□□ 0.03
ABCD3P28288 CICP6-201ENST00000457191 2729 ntBASIC15.23■□□□□ 0.03
ABCD3P28288 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.23■□□□□ 0.03
ABCD3P28288 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ABCD3P28288 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.23■□□□□ 0.03
ABCD3P28288 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.23■□□□□ 0.03
ABCD3P28288 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ABCD3P28288 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.23■□□□□ 0.03
ABCD3P28288 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ABCD3P28288 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.22■□□□□ 0.03
ABCD3P28288 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.22■□□□□ 0.03
ABCD3P28288 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ABCD3P28288 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ABCD3P28288 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.22■□□□□ 0.03
ABCD3P28288 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ABCD3P28288 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.22■□□□□ 0.03
ABCD3P28288 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ABCD3P28288 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.22■□□□□ 0.03
ABCD3P28288 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ABCD3P28288 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.22■□□□□ 0.03
ABCD3P28288 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ABCD3P28288 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ABCD3P28288 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ABCD3P28288 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ABCD3P28288 ALOX12P2-203ENST00000570921 1945 ntBASIC15.22■□□□□ 0.03
ABCD3P28288 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms