Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CHMP24386 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.53■□□□□ 0.08
CHMP24386 ME2P1-201ENST00000426028 1970 ntBASIC15.53■□□□□ 0.08
CHMP24386 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.53■□□□□ 0.08
CHMP24386 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CHMP24386 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 PMS2P7-201ENST00000506558 1336 ntBASIC15.52■□□□□ 0.08
CHMP24386 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP24386 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.52■□□□□ 0.08
CHMP24386 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP24386 PRSS29P-201ENST00000440800 595 ntBASIC15.52■□□□□ 0.08
CHMP24386 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP24386 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
CHMP24386 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.52■□□□□ 0.08
CHMP24386 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP24386 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP24386 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP24386 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP24386 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CHMP24386 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CHMP24386 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP24386 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP24386 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP24386 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP24386 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP24386 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CHMP24386 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.52■□□□□ 0.07
CHMP24386 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP24386 AC024909.3-201ENST00000611513 2257 ntBASIC15.52■□□□□ 0.07
CHMP24386 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP24386 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP24386 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP24386 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.52■□□□□ 0.07
CHMP24386 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP24386 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CHMP24386 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP24386 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP24386 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP24386 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.52■□□□□ 0.07
CHMP24386 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP24386 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 HYMAI-201ENST00000635591 3347 ntBASIC15.51■□□□□ 0.07
CHMP24386 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CHMP24386 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CHMP24386 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CHMP24386 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CHMP24386 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.51■□□□□ 0.07
CHMP24386 AC108073.2-201ENST00000464002 357 ntBASIC15.51■□□□□ 0.07
CHMP24386 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CHMP24386 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHMP24386 AL671883.3-201ENST00000603274 991 ntBASIC15.51■□□□□ 0.07
CHMP24386 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP24386 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.51■□□□□ 0.07
CHMP24386 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.51■□□□□ 0.07
CHMP24386 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.51■□□□□ 0.07
CHMP24386 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP24386 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP24386 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP24386 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CHMP24386 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP24386 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP24386 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP24386 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms