Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CSN3P07498 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSN3P07498 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.12□□□□□ -0.31
CSN3P07498 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.12□□□□□ -0.31
CSN3P07498 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CSN3P07498 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.12□□□□□ -0.31
CSN3P07498 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.12□□□□□ -0.31
CSN3P07498 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.12□□□□□ -0.31
CSN3P07498 RNA5SP415-201ENST00000517246 115 ntBASIC13.12□□□□□ -0.31
CSN3P07498 SLC25A1P1-201ENST00000528351 927 ntBASIC13.12□□□□□ -0.31
CSN3P07498 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.12□□□□□ -0.31
CSN3P07498 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSN3P07498 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.12□□□□□ -0.31
CSN3P07498 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.12□□□□□ -0.31
CSN3P07498 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.12□□□□□ -0.31
CSN3P07498 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.12□□□□□ -0.31
CSN3P07498 AF228730.7-201ENST00000641842 219 ntBASIC13.12□□□□□ -0.31
CSN3P07498 SBF1P1-201ENST00000444527 5631 ntBASIC13.12□□□□□ -0.31
CSN3P07498 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSN3P07498 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSN3P07498 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSN3P07498 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSN3P07498 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSN3P07498 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.12□□□□□ -0.31
CSN3P07498 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.12□□□□□ -0.31
CSN3P07498 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSN3P07498 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSN3P07498 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSN3P07498 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.12□□□□□ -0.31
CSN3P07498 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSN3P07498 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSN3P07498 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.12□□□□□ -0.31
CSN3P07498 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSN3P07498 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CSN3P07498 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSN3P07498 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSN3P07498 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CSN3P07498 GPR89P-201ENST00000407924 1495 ntBASIC13.11□□□□□ -0.31
CSN3P07498 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.11□□□□□ -0.31
CSN3P07498 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSN3P07498 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
CSN3P07498 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.11□□□□□ -0.31
CSN3P07498 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CSN3P07498 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.11□□□□□ -0.31
CSN3P07498 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.11□□□□□ -0.31
CSN3P07498 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 UNC93B6-202ENST00000528242 690 ntBASIC13.11□□□□□ -0.31
CSN3P07498 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.11□□□□□ -0.31
CSN3P07498 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.11□□□□□ -0.31
CSN3P07498 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.11□□□□□ -0.31
CSN3P07498 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CSN3P07498 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSN3P07498 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CSN3P07498 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.11□□□□□ -0.31
CSN3P07498 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
CSN3P07498 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSN3P07498 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSN3P07498 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CSN3P07498 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.1□□□□□ -0.31
CSN3P07498 PCDHB17P-201ENST00000539533 2393 ntBASIC13.1□□□□□ -0.31
CSN3P07498 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.1□□□□□ -0.31
CSN3P07498 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.1□□□□□ -0.31
CSN3P07498 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.1□□□□□ -0.31
CSN3P07498 AL603756.1-201ENST00000606511 2163 ntBASIC13.1□□□□□ -0.31
CSN3P07498 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CSN3P07498 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CSN3P07498 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 RPS15P9-201ENST00000494093 319 ntBASIC13.1□□□□□ -0.31
CSN3P07498 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.1□□□□□ -0.31
CSN3P07498 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.1□□□□□ -0.31
CSN3P07498 AC145285.3-201ENST00000564603 959 ntBASIC13.1□□□□□ -0.31
CSN3P07498 AC106730.1-201ENST00000566722 1090 ntBASIC13.1□□□□□ -0.31
CSN3P07498 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.1□□□□□ -0.31
CSN3P07498 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CSN3P07498 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms