Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
HCN1O60741 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HCN1O60741 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HCN1O60741 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.53■□□□□ 0.08
HCN1O60741 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HCN1O60741 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HCN1O60741 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HCN1O60741 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
HCN1O60741 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HCN1O60741 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.53■□□□□ 0.08
HCN1O60741 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HCN1O60741 AC096734.2-201ENST00000562054 433 ntBASIC15.53■□□□□ 0.08
HCN1O60741 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HCN1O60741 AC010327.4-202ENST00000591484 748 ntBASIC15.53■□□□□ 0.08
HCN1O60741 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HCN1O60741 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HCN1O60741 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
HCN1O60741 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HCN1O60741 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HCN1O60741 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.52■□□□□ 0.08
HCN1O60741 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HCN1O60741 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HCN1O60741 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HCN1O60741 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HCN1O60741 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.52■□□□□ 0.08
HCN1O60741 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HCN1O60741 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.52■□□□□ 0.08
HCN1O60741 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HCN1O60741 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.52■□□□□ 0.08
HCN1O60741 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HCN1O60741 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HCN1O60741 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HCN1O60741 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
HCN1O60741 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.52■□□□□ 0.08
HCN1O60741 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.52■□□□□ 0.08
HCN1O60741 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.52■□□□□ 0.08
HCN1O60741 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.52■□□□□ 0.08
HCN1O60741 AC112482.1-201ENST00000492080 688 ntBASIC15.52■□□□□ 0.08
HCN1O60741 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.52■□□□□ 0.08
HCN1O60741 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.52■□□□□ 0.08
HCN1O60741 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.52■□□□□ 0.08
HCN1O60741 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.52■□□□□ 0.08
HCN1O60741 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HCN1O60741 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
HCN1O60741 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HCN1O60741 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HCN1O60741 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HCN1O60741 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HCN1O60741 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HCN1O60741 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.52■□□□□ 0.07
HCN1O60741 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
HCN1O60741 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HCN1O60741 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.52■□□□□ 0.07
HCN1O60741 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
HCN1O60741 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
HCN1O60741 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HCN1O60741 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
HCN1O60741 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.52■□□□□ 0.07
HCN1O60741 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
HCN1O60741 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.52■□□□□ 0.07
HCN1O60741 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
HCN1O60741 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
HCN1O60741 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
HCN1O60741 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HCN1O60741 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.51■□□□□ 0.07
HCN1O60741 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
HCN1O60741 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.51■□□□□ 0.07
HCN1O60741 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HCN1O60741 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HCN1O60741 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HCN1O60741 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCN1O60741 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms