Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
FOXS1O43638 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXS1O43638 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
FOXS1O43638 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXS1O43638 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
FOXS1O43638 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FOXS1O43638 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXS1O43638 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXS1O43638 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXS1O43638 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXS1O43638 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXS1O43638 ME2P1-201ENST00000426028 1970 ntBASIC15.51■□□□□ 0.07
FOXS1O43638 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXS1O43638 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXS1O43638 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXS1O43638 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FOXS1O43638 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXS1O43638 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXS1O43638 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXS1O43638 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXS1O43638 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXS1O43638 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXS1O43638 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXS1O43638 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FOXS1O43638 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 HLA-H-201ENST00000383620 1096 ntBASIC15.5■□□□□ 0.07
FOXS1O43638 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXS1O43638 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXS1O43638 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FOXS1O43638 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXS1O43638 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXS1O43638 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FOXS1O43638 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FOXS1O43638 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXS1O43638 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
FOXS1O43638 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
FOXS1O43638 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXS1O43638 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXS1O43638 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXS1O43638 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXS1O43638 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FOXS1O43638 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXS1O43638 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
FOXS1O43638 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXS1O43638 POU5F1P6-201ENST00000466990 990 ntBASIC15.49■□□□□ 0.07
FOXS1O43638 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.49■□□□□ 0.07
FOXS1O43638 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.49■□□□□ 0.07
FOXS1O43638 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXS1O43638 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 AC106028.4-201ENST00000614509 607 ntBASIC15.49■□□□□ 0.07
FOXS1O43638 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXS1O43638 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXS1O43638 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FOXS1O43638 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXS1O43638 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXS1O43638 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXS1O43638 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXS1O43638 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXS1O43638 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXS1O43638 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXS1O43638 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXS1O43638 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
FOXS1O43638 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXS1O43638 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.48■□□□□ 0.07
FOXS1O43638 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXS1O43638 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FOXS1O43638 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXS1O43638 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXS1O43638 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms