Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.46■□□□□ 0.07
ARHGEF9O43307 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ARHGEF9O43307 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.46■□□□□ 0.07
ARHGEF9O43307 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ARHGEF9O43307 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 RCN1P2-201ENST00000398357 915 ntBASIC15.46■□□□□ 0.07
ARHGEF9O43307 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.46■□□□□ 0.07
ARHGEF9O43307 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ARHGEF9O43307 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.46■□□□□ 0.07
ARHGEF9O43307 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.46■□□□□ 0.07
ARHGEF9O43307 BNIP3P18-201ENST00000593976 575 ntBASIC15.46■□□□□ 0.07
ARHGEF9O43307 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.46■□□□□ 0.07
ARHGEF9O43307 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 AL603756.1-201ENST00000606511 2163 ntBASIC15.46■□□□□ 0.07
ARHGEF9O43307 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ARHGEF9O43307 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
ARHGEF9O43307 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.06
ARHGEF9O43307 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
ARHGEF9O43307 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
ARHGEF9O43307 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
ARHGEF9O43307 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ARHGEF9O43307 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.46■□□□□ 0.06
ARHGEF9O43307 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ARHGEF9O43307 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
ARHGEF9O43307 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF9O43307 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF9O43307 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF9O43307 INTS4P1-201ENST00000438455 1935 ntBASIC15.45■□□□□ 0.06
ARHGEF9O43307 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF9O43307 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF9O43307 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF9O43307 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF9O43307 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF9O43307 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF9O43307 AC114341.1-201ENST00000618070 349 ntBASIC15.45■□□□□ 0.06
ARHGEF9O43307 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.45■□□□□ 0.06
ARHGEF9O43307 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF9O43307 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF9O43307 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF9O43307 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.45■□□□□ 0.06
ARHGEF9O43307 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.44■□□□□ 0.06
ARHGEF9O43307 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF9O43307 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms