Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 FAM220BP-201ENST00000377689 816 ntBASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 LINC02560-201ENST00000596379 459 ntBASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 AL590560.3-201ENST00000623350 461 ntBASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 AL512652.2-201ENST00000625156 1716 ntBASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 AL035456.1-201ENST00000456064 1369 ntBASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 MTND6P24-201ENST00000440466 518 ntBASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 AC190387.1-201ENST00000551683 408 ntBASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 AC100757.3-201ENST00000622361 1406 ntBASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3FA6NER0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 FAM207CP-201ENST00000443486 507 ntBASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 AC020765.3-201ENST00000613051 740 ntBASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 AL138828.2-201ENST00000615812 383 ntBASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 AC008761.3-201ENST00000624803 892 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms