Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 AC126755.1-201ENST00000525846 6405 ntBASIC11.33□□□□□ -0.6
LINC00959A0A1B0GUT2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 AL353732.1-201ENST00000569618 1459 ntBASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 AC105917.1-201ENST00000506637 2539 ntBASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 GPAA1P2-202ENST00000606848 1787 ntBASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 SART3-203ENST00000546611 1184 ntBASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 CYP2A7P1-201ENST00000595391 815 ntBASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00959A0A1B0GUT2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 PMS2P1-201ENST00000431037 1228 ntBASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 FGFR3P6-201ENST00000457012 610 ntBASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 KRT18P31-201ENST00000506277 1292 ntBASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms