Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-3A0A0A0MS03 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 RNU1-129P-201ENST00000384064 167 ntBASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 HCG4P8-203ENST00000443049 980 ntBASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 OR7E14P-202ENST00000530490 1290 ntBASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 U1.21-201ENST00000580816 167 ntBASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV5-3A0A0A0MS03 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 UPK3BP1-201ENST00000428678 509 ntBASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 FAM185BP-201ENST00000443595 716 ntBASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 MIR3909-201ENST00000579518 119 ntBASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 MIR4515-201ENST00000584082 81 ntBASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 AC008735.5-201ENST00000623544 497 ntBASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-3A0A0A0MS03 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV5-3A0A0A0MS03 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV5-3A0A0A0MS03 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.06
TRBV5-3A0A0A0MS03 U82695.1-201ENST00000635752 1889 ntBASIC15.46■□□□□ 0.06
TRBV5-3A0A0A0MS03 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV5-3A0A0A0MS03 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV5-3A0A0A0MS03 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV5-3A0A0A0MS03 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 MST1L-201ENST00000442552 2185 ntBASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms