Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 PP12613-201ENST00000424958 2230 ntBASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 AL391256.1-201ENST00000443260 1855 ntBASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 AL035633.1-201ENST00000406139 838 ntBASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 TSPY16P-201ENST00000449843 468 ntBASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 SPTSSB-204ENST00000617024 1292 ntBASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 AC106820.2-201ENST00000563775 3264 ntBASIC19.1■□□□□ 0.65
CTDP1Q9Y5B0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 AL353705.2-201ENST00000428243 662 ntBASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 COX20P2-201ENST00000452636 358 ntBASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 AC027369.6-201ENST00000525520 931 ntBASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTDP1Q9Y5B0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CTDP1Q9Y5B0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 AC073592.8-201ENST00000624126 511 ntBASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 AC073439.1-201ENST00000624121 1774 ntBASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTDP1Q9Y5B0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms