Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PKP3Q9Y446 GPAA1P2-202ENST00000606848 1787 ntBASIC16.64■□□□□ 0.25
PKP3Q9Y446 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PKP3Q9Y446 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PKP3Q9Y446 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PKP3Q9Y446 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PKP3Q9Y446 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.64■□□□□ 0.25
PKP3Q9Y446 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PKP3Q9Y446 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PKP3Q9Y446 PKD1P5-201ENST00000532415 10291 ntBASIC16.64■□□□□ 0.25
PKP3Q9Y446 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PKP3Q9Y446 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PKP3Q9Y446 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PKP3Q9Y446 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PKP3Q9Y446 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.64■□□□□ 0.25
PKP3Q9Y446 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.64■□□□□ 0.25
PKP3Q9Y446 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.64■□□□□ 0.25
PKP3Q9Y446 AC023274.1-201ENST00000418278 595 ntBASIC16.64■□□□□ 0.25
PKP3Q9Y446 AP000347.1-202ENST00000435868 847 ntBASIC16.64■□□□□ 0.25
PKP3Q9Y446 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PKP3Q9Y446 AC109635.5-201ENST00000533593 962 ntBASIC16.64■□□□□ 0.25
PKP3Q9Y446 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.64■□□□□ 0.25
PKP3Q9Y446 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.64■□□□□ 0.25
PKP3Q9Y446 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.64■□□□□ 0.25
PKP3Q9Y446 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PKP3Q9Y446 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PKP3Q9Y446 AC079328.2-201ENST00000561241 3354 ntBASIC16.64■□□□□ 0.25
PKP3Q9Y446 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PKP3Q9Y446 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PKP3Q9Y446 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 GGT3P-204ENST00000453783 1664 ntBASIC16.63■□□□□ 0.25
PKP3Q9Y446 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP3Q9Y446 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 GGT4P-201ENST00000623672 1708 ntBASIC16.63■□□□□ 0.25
PKP3Q9Y446 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP3Q9Y446 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PKP3Q9Y446 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.63■□□□□ 0.25
PKP3Q9Y446 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.63■□□□□ 0.25
PKP3Q9Y446 AC020765.3-201ENST00000613051 740 ntBASIC16.63■□□□□ 0.25
PKP3Q9Y446 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 AC018695.7-201ENST00000624587 2492 ntBASIC16.63■□□□□ 0.25
PKP3Q9Y446 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.63■□□□□ 0.25
PKP3Q9Y446 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.63■□□□□ 0.25
PKP3Q9Y446 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP3Q9Y446 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP3Q9Y446 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PKP3Q9Y446 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PKP3Q9Y446 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.63■□□□□ 0.25
PKP3Q9Y446 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP3Q9Y446 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PKP3Q9Y446 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.62■□□□□ 0.25
PKP3Q9Y446 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP3Q9Y446 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PKP3Q9Y446 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 AC002056.1-201ENST00000395613 760 ntBASIC16.62■□□□□ 0.25
PKP3Q9Y446 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PKP3Q9Y446 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.62■□□□□ 0.25
PKP3Q9Y446 AC112191.1-201ENST00000523689 701 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms