Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 AC008608.2-201ENST00000606089 416 ntBASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 AL139288.1-201ENST00000623748 933 ntBASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 AL022326.1-202ENST00000641533 845 ntBASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HHLA3Q9XRX5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 SLC25A1P3-201ENST00000395415 828 ntBASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 ACTG1P4-201ENST00000425123 1122 ntBASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 SAPCD2P3-201ENST00000455031 850 ntBASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 NKAPP1-205ENST00000585790 367 ntBASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 REXO1L6P-202ENST00000619970 1078 ntBASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 AL355877.3-201ENST00000622820 899 ntBASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 AC004817.3-201ENST00000602957 2129 ntBASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.17□□□□□ -0.46
HHLA3Q9XRX5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms