Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 KRT17P8-201ENST00000540749 863 ntBASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 AC106886.1-201ENST00000568660 600 ntBASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 AL589739.1-201ENST00000607720 493 ntBASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 AL353705.2-201ENST00000428243 662 ntBASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 MTND6P24-201ENST00000440466 518 ntBASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 AGGF1P2-201ENST00000426656 2106 ntBASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PDLIM7Q9NR12 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 HLA-A-202ENST00000376806 1854 ntBASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 AC087499.6-201ENST00000411576 835 ntBASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 AL391825.1-201ENST00000457671 1364 ntBASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 AC011495.1-201ENST00000498085 584 ntBASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 RAB43P1-201ENST00000561790 589 ntBASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
PDLIM7Q9NR12 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 AC022210.1-201ENST00000449856 793 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms