Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.49■□□□□ 0.39
CD248Q9HCU0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CD248Q9HCU0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD248Q9HCU0 KRT18P28-201ENST00000453838 1332 ntBASIC17.48■□□□□ 0.39
CD248Q9HCU0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD248Q9HCU0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD248Q9HCU0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD248Q9HCU0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD248Q9HCU0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD248Q9HCU0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 AL031432.2-201ENST00000566714 459 ntBASIC17.48■□□□□ 0.39
CD248Q9HCU0 AL928711.1-201ENST00000570165 459 ntBASIC17.48■□□□□ 0.39
CD248Q9HCU0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD248Q9HCU0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD248Q9HCU0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD248Q9HCU0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD248Q9HCU0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CD248Q9HCU0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD248Q9HCU0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD248Q9HCU0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 REXO1L11P-201ENST00000620964 1927 ntBASIC17.47■□□□□ 0.39
CD248Q9HCU0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.47■□□□□ 0.39
CD248Q9HCU0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD248Q9HCU0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CD248Q9HCU0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.46■□□□□ 0.39
CD248Q9HCU0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD248Q9HCU0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CD248Q9HCU0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD248Q9HCU0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CD248Q9HCU0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD248Q9HCU0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CD248Q9HCU0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CD248Q9HCU0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD248Q9HCU0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD248Q9HCU0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD248Q9HCU0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CD248Q9HCU0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CD248Q9HCU0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD248Q9HCU0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CD248Q9HCU0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CD248Q9HCU0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms