Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 PRYP5-201ENST00000451909 266 ntBASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 AC145285.3-201ENST00000564603 959 ntBASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 MTDHP4-201ENST00000600287 670 ntBASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 AL139288.1-201ENST00000623748 933 ntBASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 AC006449.6-201ENST00000612330 2296 ntBASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXP3Q9BZS1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 KRT8P39-201ENST00000396270 1433 ntBASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 MED15P5-201ENST00000423150 992 ntBASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 POU5F1P6-201ENST00000466990 990 ntBASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 AL356488.2-201ENST00000602755 427 ntBASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 AC140113.2-201ENST00000604370 208 ntBASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 AC027601.4-201ENST00000611259 610 ntBASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 AL512652.2-201ENST00000625156 1716 ntBASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXP3Q9BZS1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 RNA5SP415-201ENST00000517246 115 ntBASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 MIR4492-201ENST00000581627 80 ntBASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 AC008735.5-201ENST00000623544 497 ntBASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXP3Q9BZS1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms