Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 AL118508.1-201ENST00000613502 2345 ntBASIC19.22■□□□□ 0.67
SLF1Q9BQI6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 MIR4453-201ENST00000584019 89 ntBASIC19.22■□□□□ 0.67
SLF1Q9BQI6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 AL035633.1-201ENST00000406139 838 ntBASIC19.21■□□□□ 0.67
SLF1Q9BQI6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 PRYP6-201ENST00000514804 343 ntBASIC19.21■□□□□ 0.67
SLF1Q9BQI6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 IGHV3-42-201ENST00000520410 361 ntBASIC19.21■□□□□ 0.67
SLF1Q9BQI6 AC069120.2-201ENST00000524091 540 ntBASIC19.21■□□□□ 0.67
SLF1Q9BQI6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 RARRES2P9-201ENST00000565168 469 ntBASIC19.21■□□□□ 0.67
SLF1Q9BQI6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 AL158211.3-201ENST00000607385 239 ntBASIC19.21■□□□□ 0.67
SLF1Q9BQI6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 PCDHB17P-201ENST00000539533 2393 ntBASIC19.21■□□□□ 0.67
SLF1Q9BQI6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLF1Q9BQI6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 AL390754.1-201ENST00000619088 582 ntBASIC19.2■□□□□ 0.66
SLF1Q9BQI6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLF1Q9BQI6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 AP3S2-216ENST00000617003 1561 ntBASIC19.19■□□□□ 0.66
SLF1Q9BQI6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLF1Q9BQI6 SNX33P1-201ENST00000592116 1762 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms