Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 TOP3BP1-201ENST00000420768 1380 ntBASIC15.99■□□□□ 0.15
VPS33AQ96AX1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
VPS33AQ96AX1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 AP001269.4-201ENST00000609611 512 ntBASIC15.98■□□□□ 0.15
VPS33AQ96AX1 NPAP1P7-201ENST00000613027 823 ntBASIC15.98■□□□□ 0.15
VPS33AQ96AX1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.98■□□□□ 0.15
VPS33AQ96AX1 AL136379.1-201ENST00000623471 2642 ntBASIC15.98■□□□□ 0.15
VPS33AQ96AX1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 AC006449.6-201ENST00000612330 2296 ntBASIC15.97■□□□□ 0.15
VPS33AQ96AX1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 AP005117.1-201ENST00000584346 1413 ntBASIC15.97■□□□□ 0.15
VPS33AQ96AX1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 AC012615.1-201ENST00000565797 1299 ntBASIC15.97■□□□□ 0.15
VPS33AQ96AX1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.97■□□□□ 0.15
VPS33AQ96AX1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.97■□□□□ 0.15
VPS33AQ96AX1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms