Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC6.52□□□□□ -1.36
SYNE2Q8WXH0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.36
SYNE2Q8WXH0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
SYNE2Q8WXH0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AC093909.3-201ENST00000504783 336 ntBASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 GOLGA2P9-201ENST00000596977 1937 ntBASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 ECM1P1-201ENST00000604092 1279 ntBASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AC079178.1-201ENST00000420915 656 ntBASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AL356000.1-201ENST00000441073 1238 ntBASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 USP40-206ENST00000443711 628 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AC006335.1-201ENST00000445200 547 ntBASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AC051619.9-201ENST00000623237 597 ntBASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 PDLIM1P1-201ENST00000604187 969 ntBASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 DPM3-202ENST00000368399 517 ntBASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AC005740.2-201ENST00000511085 419 ntBASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE2Q8WXH0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms