Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3IL1Q8TBN0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 AK4P3-201ENST00000418260 669 ntBASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 AL020989.1-201ENST00000422979 469 ntBASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 PMPCAP1-201ENST00000508114 1576 ntBASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB3IL1Q8TBN0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IL1Q8TBN0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RAB3IL1Q8TBN0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IL1Q8TBN0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IL1Q8TBN0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
RAB3IL1Q8TBN0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IL1Q8TBN0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IL1Q8TBN0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB3IL1Q8TBN0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 AC087388.1-201ENST00000571370 1112 ntBASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 IGHV3-41-201ENST00000613121 348 ntBASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB3IL1Q8TBN0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms