Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 API5-211ENST00000534695 560 ntTSL 5 BASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 AC022211.2-201ENST00000585075 2527 ntBASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 AC116353.5-201ENST00000638148 1699 ntBASIC16.77■□□□□ 0.28
SYNPOQ8N3V7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SYNPOQ8N3V7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 AC138969.3-201ENST00000546612 1459 ntBASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 AC138932.2-201ENST00000548268 1459 ntBASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 AC126755.4-201ENST00000549796 1459 ntBASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 AC105021.1-202ENST00000570572 669 ntBASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 AC073439.1-201ENST00000624121 1774 ntBASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.76■□□□□ 0.27
SYNPOQ8N3V7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 TUBB8P12-201ENST00000308911 1335 ntBASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 TUBB7P-202ENST00000428444 1305 ntBASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 TUBB8P7-204ENST00000567960 1332 ntBASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPOQ8N3V7 PKD1P1-201ENST00000458669 6805 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms