Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 AC010653.2-201ENST00000623505 997 ntBASIC15.07■□□□□ 0
CROCCP3Q8IVE0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CROCCP3Q8IVE0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 AC096633.1-201ENST00000422446 749 ntBASIC15.06■□□□□ 0
CROCCP3Q8IVE0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 IGHV3-52-201ENST00000519770 353 ntBASIC15.06■□□□□ 0
CROCCP3Q8IVE0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 AC024563.2-201ENST00000603282 481 ntBASIC15.06■□□□□ 0
CROCCP3Q8IVE0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 AC002310.6-201ENST00000624451 1377 ntBASIC15.06■□□□□ 0
CROCCP3Q8IVE0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.06■□□□□ 0
CROCCP3Q8IVE0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.06■□□□□ 0
CROCCP3Q8IVE0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.05■□□□□ 0
CROCCP3Q8IVE0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 HLA-J-202ENST00000469281 1241 ntBASIC15.05■□□□□ -0
CROCCP3Q8IVE0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 RPPH1-201ENST00000516869 333 ntBASIC15.05■□□□□ -0
CROCCP3Q8IVE0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 AC006058.3-201ENST00000606217 1069 ntBASIC15.05■□□□□ -0
CROCCP3Q8IVE0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 AL645728.1-201ENST00000366221 2101 ntBASIC15.05■□□□□ -0
CROCCP3Q8IVE0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 AC010327.5-201ENST00000586923 3061 ntBASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms