Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 AL136038.4-201ENST00000603606 1261 ntBASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 AC013467.2-201ENST00000605472 835 ntBASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 AL353692.3-201ENST00000407031 1396 ntBASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC6LQ2NKX8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 AC020658.6-201ENST00000623564 1870 ntBASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 STK19B-204ENST00000512515 211 ntBASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 AP000525.1-201ENST00000608286 694 ntBASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 AC073912.3-201ENST00000624414 853 ntBASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC6LQ2NKX8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 AC007292.2-201ENST00000593524 1812 ntBASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.58■□□□□ 0.41
ERCC6LQ2NKX8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 IGHGP-201ENST00000390555 1178 ntBASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 AP003733.1-201ENST00000491725 852 ntBASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 AL355075.4-201ENST00000554988 638 ntBASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms