Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ATP1B3P54709 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
ATP1B3P54709 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ATP1B3P54709 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ATP1B3P54709 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.44□□□□□ -0.1
ATP1B3P54709 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ATP1B3P54709 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.44□□□□□ -0.1
ATP1B3P54709 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ATP1B3P54709 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATP1B3P54709 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.44□□□□□ -0.1
ATP1B3P54709 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.44□□□□□ -0.1
ATP1B3P54709 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ATP1B3P54709 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ATP1B3P54709 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ATP1B3P54709 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
ATP1B3P54709 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.43□□□□□ -0.1
ATP1B3P54709 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ATP1B3P54709 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ATP1B3P54709 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.43□□□□□ -0.1
ATP1B3P54709 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ATP1B3P54709 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.43□□□□□ -0.1
ATP1B3P54709 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.43□□□□□ -0.1
ATP1B3P54709 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.43□□□□□ -0.1
ATP1B3P54709 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
ATP1B3P54709 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ATP1B3P54709 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.43□□□□□ -0.1
ATP1B3P54709 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.43□□□□□ -0.1
ATP1B3P54709 AF228730.7-201ENST00000641842 219 ntBASIC14.43□□□□□ -0.1
ATP1B3P54709 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
ATP1B3P54709 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.43□□□□□ -0.1
ATP1B3P54709 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.43□□□□□ -0.1
ATP1B3P54709 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.43□□□□□ -0.1
ATP1B3P54709 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ATP1B3P54709 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.43□□□□□ -0.1
ATP1B3P54709 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.43□□□□□ -0.1
ATP1B3P54709 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.43□□□□□ -0.1
ATP1B3P54709 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.43□□□□□ -0.1
ATP1B3P54709 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.43□□□□□ -0.1
ATP1B3P54709 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATP1B3P54709 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ATP1B3P54709 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.42□□□□□ -0.1
ATP1B3P54709 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.42□□□□□ -0.1
ATP1B3P54709 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ATP1B3P54709 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.42□□□□□ -0.1
ATP1B3P54709 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ATP1B3P54709 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.42□□□□□ -0.1
ATP1B3P54709 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ATP1B3P54709 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.42□□□□□ -0.1
ATP1B3P54709 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.42□□□□□ -0.1
ATP1B3P54709 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
ATP1B3P54709 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.42□□□□□ -0.1
ATP1B3P54709 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.42□□□□□ -0.1
ATP1B3P54709 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.42□□□□□ -0.1
ATP1B3P54709 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.42□□□□□ -0.1
ATP1B3P54709 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms