Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.25■□□□□ 0.51
GPC3P51654 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC3P51654 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.25■□□□□ 0.51
GPC3P51654 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC3P51654 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
GPC3P51654 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
GPC3P51654 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC3P51654 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
GPC3P51654 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GPC3P51654 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GPC3P51654 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC3P51654 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.25■□□□□ 0.51
GPC3P51654 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
GPC3P51654 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.25■□□□□ 0.51
GPC3P51654 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.25■□□□□ 0.51
GPC3P51654 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.25■□□□□ 0.51
GPC3P51654 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.25■□□□□ 0.51
GPC3P51654 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.25■□□□□ 0.51
GPC3P51654 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.25■□□□□ 0.51
GPC3P51654 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.25■□□□□ 0.51
GPC3P51654 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.25■□□□□ 0.51
GPC3P51654 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.25■□□□□ 0.51
GPC3P51654 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.25■□□□□ 0.51
GPC3P51654 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.25■□□□□ 0.51
GPC3P51654 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.25■□□□□ 0.51
GPC3P51654 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.25■□□□□ 0.51
GPC3P51654 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC3P51654 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC3P51654 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.25■□□□□ 0.51
GPC3P51654 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.25■□□□□ 0.51
GPC3P51654 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC3P51654 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GPC3P51654 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
GPC3P51654 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPC3P51654 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.24■□□□□ 0.51
GPC3P51654 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
GPC3P51654 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GPC3P51654 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.24■□□□□ 0.51
GPC3P51654 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.24■□□□□ 0.51
GPC3P51654 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.24■□□□□ 0.51
GPC3P51654 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
GPC3P51654 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.24■□□□□ 0.51
GPC3P51654 BCRP1-201ENST00000444246 691 ntBASIC18.24■□□□□ 0.51
GPC3P51654 AC125807.1-201ENST00000483097 614 ntBASIC18.24■□□□□ 0.51
GPC3P51654 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GPC3P51654 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.24■□□□□ 0.51
GPC3P51654 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.24■□□□□ 0.51
GPC3P51654 MIR6080-201ENST00000617359 66 ntBASIC18.24■□□□□ 0.51
GPC3P51654 AL139011.1-202ENST00000642063 584 ntBASIC18.24■□□□□ 0.51
GPC3P51654 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.24■□□□□ 0.51
GPC3P51654 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.24■□□□□ 0.51
GPC3P51654 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
GPC3P51654 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
GPC3P51654 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC3P51654 FOXO1B-201ENST00000504678 1527 ntBASIC18.23■□□□□ 0.51
GPC3P51654 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.23■□□□□ 0.51
GPC3P51654 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GPC3P51654 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC3P51654 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC3P51654 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC3P51654 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.23■□□□□ 0.51
GPC3P51654 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GPC3P51654 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GPC3P51654 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.23■□□□□ 0.51
GPC3P51654 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC3P51654 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC3P51654 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GPC3P51654 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.23■□□□□ 0.51
GPC3P51654 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms