Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.34□□□□□ -0.11
HCFC1P51610 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
HCFC1P51610 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HCFC1P51610 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
HCFC1P51610 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.33□□□□□ -0.11
HCFC1P51610 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
HCFC1P51610 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
HCFC1P51610 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HCFC1P51610 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCFC1P51610 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCFC1P51610 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCFC1P51610 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.33□□□□□ -0.12
HCFC1P51610 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCFC1P51610 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.33□□□□□ -0.12
HCFC1P51610 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.33□□□□□ -0.12
HCFC1P51610 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.33□□□□□ -0.12
HCFC1P51610 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HCFC1P51610 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HCFC1P51610 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HCFC1P51610 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCFC1P51610 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCFC1P51610 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HCFC1P51610 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
HCFC1P51610 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HCFC1P51610 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.33□□□□□ -0.12
HCFC1P51610 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HCFC1P51610 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HCFC1P51610 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
HCFC1P51610 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 AL512384.1-201ENST00000406683 331 ntBASIC14.32□□□□□ -0.12
HCFC1P51610 TPRX2P-201ENST00000535362 881 ntBASIC14.32□□□□□ -0.12
HCFC1P51610 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HCFC1P51610 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.32□□□□□ -0.12
HCFC1P51610 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.32□□□□□ -0.12
HCFC1P51610 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.32□□□□□ -0.12
HCFC1P51610 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HCFC1P51610 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HCFC1P51610 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HCFC1P51610 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.32□□□□□ -0.12
HCFC1P51610 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.32□□□□□ -0.12
HCFC1P51610 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HCFC1P51610 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HCFC1P51610 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.32□□□□□ -0.12
HCFC1P51610 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HCFC1P51610 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.32□□□□□ -0.12
HCFC1P51610 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.32□□□□□ -0.12
HCFC1P51610 AC044860.1-202ENST00000559481 777 ntBASIC14.32□□□□□ -0.12
HCFC1P51610 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.32□□□□□ -0.12
HCFC1P51610 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.32□□□□□ -0.12
HCFC1P51610 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.32□□□□□ -0.12
HCFC1P51610 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.32□□□□□ -0.12
HCFC1P51610 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.32□□□□□ -0.12
HCFC1P51610 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HCFC1P51610 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HCFC1P51610 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCFC1P51610 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
HCFC1P51610 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCFC1P51610 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.31□□□□□ -0.12
HCFC1P51610 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCFC1P51610 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HCFC1P51610 AC084018.2-201ENST00000613093 2607 ntBASIC14.31□□□□□ -0.12
HCFC1P51610 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HCFC1P51610 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HCFC1P51610 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCFC1P51610 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCFC1P51610 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.31□□□□□ -0.12
HCFC1P51610 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.31□□□□□ -0.12
HCFC1P51610 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCFC1P51610 AC112492.5-201ENST00000421897 457 ntBASIC14.31□□□□□ -0.12
HCFC1P51610 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HCFC1P51610 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.31□□□□□ -0.12
HCFC1P51610 AC007389.4-201ENST00000454674 793 ntBASIC14.31□□□□□ -0.12
HCFC1P51610 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.31□□□□□ -0.12
HCFC1P51610 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms