Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.68■□□□□ 0.26
LSP1P33241 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 AL512652.2-201ENST00000625156 1716 ntBASIC16.68■□□□□ 0.26
LSP1P33241 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LSP1P33241 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.68■□□□□ 0.26
LSP1P33241 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LSP1P33241 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 AP003071.4-201ENST00000562276 1284 ntBASIC16.68■□□□□ 0.26
LSP1P33241 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.68■□□□□ 0.26
LSP1P33241 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.68■□□□□ 0.26
LSP1P33241 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.68■□□□□ 0.26
LSP1P33241 SNX33P1-201ENST00000592116 1762 ntBASIC16.68■□□□□ 0.26
LSP1P33241 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LSP1P33241 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.68■□□□□ 0.26
LSP1P33241 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LSP1P33241 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LSP1P33241 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.67■□□□□ 0.26
LSP1P33241 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.67■□□□□ 0.26
LSP1P33241 AL353593.2-201ENST00000602529 1483 ntBASIC16.67■□□□□ 0.26
LSP1P33241 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.67■□□□□ 0.26
LSP1P33241 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.67■□□□□ 0.26
LSP1P33241 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
LSP1P33241 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.67■□□□□ 0.26
LSP1P33241 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LSP1P33241 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.67■□□□□ 0.26
LSP1P33241 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.67■□□□□ 0.26
LSP1P33241 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.67■□□□□ 0.26
LSP1P33241 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.67■□□□□ 0.26
LSP1P33241 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.67■□□□□ 0.26
LSP1P33241 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.67■□□□□ 0.26
LSP1P33241 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.67■□□□□ 0.26
LSP1P33241 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.67■□□□□ 0.26
LSP1P33241 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LSP1P33241 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LSP1P33241 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.67■□□□□ 0.26
LSP1P33241 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LSP1P33241 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LSP1P33241 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.66■□□□□ 0.26
LSP1P33241 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.66■□□□□ 0.26
LSP1P33241 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.66■□□□□ 0.26
LSP1P33241 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
LSP1P33241 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.66■□□□□ 0.26
LSP1P33241 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.66■□□□□ 0.26
LSP1P33241 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 UNC93B2-201ENST00000285383 730 ntBASIC16.66■□□□□ 0.26
LSP1P33241 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 INGX-201ENST00000359239 846 ntBASIC16.66■□□□□ 0.26
LSP1P33241 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.66■□□□□ 0.26
LSP1P33241 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LSP1P33241 POU5F1P6-201ENST00000466990 990 ntBASIC16.66■□□□□ 0.26
LSP1P33241 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LSP1P33241 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.66■□□□□ 0.26
LSP1P33241 AC034232.1-201ENST00000506026 1064 ntBASIC16.66■□□□□ 0.26
LSP1P33241 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.66■□□□□ 0.26
LSP1P33241 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.66■□□□□ 0.26
LSP1P33241 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LSP1P33241 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.66■□□□□ 0.26
LSP1P33241 AP003680.1-201ENST00000598970 3660 ntBASIC16.66■□□□□ 0.26
LSP1P33241 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.66■□□□□ 0.26
LSP1P33241 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LSP1P33241 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
LSP1P33241 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LSP1P33241 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.66■□□□□ 0.26
LSP1P33241 AC092919.2-201ENST00000623631 1645 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms