Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.73□□□□□ -0.05
HOXC12P31275 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
HOXC12P31275 AC004461.1-201ENST00000412461 403 ntBASIC14.73□□□□□ -0.05
HOXC12P31275 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.73□□□□□ -0.05
HOXC12P31275 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.73□□□□□ -0.05
HOXC12P31275 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.73□□□□□ -0.05
HOXC12P31275 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.73□□□□□ -0.05
HOXC12P31275 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HOXC12P31275 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.73□□□□□ -0.05
HOXC12P31275 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.73□□□□□ -0.05
HOXC12P31275 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HOXC12P31275 AC005498.2-205ENST00000593218 784 ntBASIC14.73□□□□□ -0.05
HOXC12P31275 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.73□□□□□ -0.05
HOXC12P31275 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.73□□□□□ -0.05
HOXC12P31275 AC091812.2-201ENST00000619081 385 ntBASIC14.73□□□□□ -0.05
HOXC12P31275 AC105339.1-204ENST00000636249 355 ntBASIC14.73□□□□□ -0.05
HOXC12P31275 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
HOXC12P31275 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.73□□□□□ -0.05
HOXC12P31275 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HOXC12P31275 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HOXC12P31275 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HOXC12P31275 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
HOXC12P31275 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HOXC12P31275 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.72□□□□□ -0.05
HOXC12P31275 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.72□□□□□ -0.05
HOXC12P31275 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.72□□□□□ -0.05
HOXC12P31275 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.72□□□□□ -0.05
HOXC12P31275 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HOXC12P31275 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 AC092068.3-201ENST00000587894 2016 ntBASIC14.72□□□□□ -0.05
HOXC12P31275 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.72□□□□□ -0.05
HOXC12P31275 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.72□□□□□ -0.05
HOXC12P31275 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.72□□□□□ -0.05
HOXC12P31275 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.72□□□□□ -0.05
HOXC12P31275 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.72□□□□□ -0.05
HOXC12P31275 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.72□□□□□ -0.05
HOXC12P31275 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HOXC12P31275 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HOXC12P31275 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HOXC12P31275 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.72□□□□□ -0.05
HOXC12P31275 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.72□□□□□ -0.05
HOXC12P31275 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.72□□□□□ -0.05
HOXC12P31275 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HOXC12P31275 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HOXC12P31275 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HOXC12P31275 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HOXC12P31275 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HOXC12P31275 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.71□□□□□ -0.05
HOXC12P31275 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
HOXC12P31275 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.71□□□□□ -0.05
HOXC12P31275 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
HOXC12P31275 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HOXC12P31275 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.71□□□□□ -0.05
HOXC12P31275 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HOXC12P31275 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.71□□□□□ -0.05
HOXC12P31275 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HOXC12P31275 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HOXC12P31275 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HOXC12P31275 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HOXC12P31275 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
HOXC12P31275 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HOXC12P31275 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
HOXC12P31275 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.71□□□□□ -0.05
HOXC12P31275 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms