Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.54■□□□□ 0.24
CHRM3P20309 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CHRM3P20309 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRM3P20309 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRM3P20309 VN2R19P-201ENST00000442399 1052 ntBASIC16.54■□□□□ 0.24
CHRM3P20309 FAM185BP-201ENST00000443595 716 ntBASIC16.54■□□□□ 0.24
CHRM3P20309 AC009947.1-201ENST00000444350 727 ntBASIC16.54■□□□□ 0.24
CHRM3P20309 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.54■□□□□ 0.24
CHRM3P20309 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 CXCL1P1-201ENST00000502804 216 ntBASIC16.54■□□□□ 0.24
CHRM3P20309 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CHRM3P20309 IGHV3-22-201ENST00000520721 359 ntBASIC16.54■□□□□ 0.24
CHRM3P20309 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRM3P20309 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.54■□□□□ 0.24
CHRM3P20309 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.54■□□□□ 0.24
CHRM3P20309 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CHRM3P20309 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.54■□□□□ 0.24
CHRM3P20309 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRM3P20309 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRM3P20309 AC012569.1-201ENST00000591191 1524 ntBASIC16.54■□□□□ 0.24
CHRM3P20309 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHRM3P20309 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.54■□□□□ 0.24
CHRM3P20309 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHRM3P20309 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRM3P20309 AC006449.5-201ENST00000610658 2098 ntBASIC16.54■□□□□ 0.24
CHRM3P20309 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 AL512652.2-201ENST00000625156 1716 ntBASIC16.53■□□□□ 0.24
CHRM3P20309 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.53■□□□□ 0.24
CHRM3P20309 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.53■□□□□ 0.24
CHRM3P20309 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CHRM3P20309 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.53■□□□□ 0.24
CHRM3P20309 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.53■□□□□ 0.24
CHRM3P20309 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHRM3P20309 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CHRM3P20309 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.53■□□□□ 0.24
CHRM3P20309 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CHRM3P20309 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CHRM3P20309 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CHRM3P20309 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRM3P20309 AC092364.2-201ENST00000596710 2692 ntBASIC16.53■□□□□ 0.24
CHRM3P20309 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
CHRM3P20309 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRM3P20309 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRM3P20309 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRM3P20309 FLJ16779-201ENST00000612722 7638 ntBASIC16.52■□□□□ 0.24
CHRM3P20309 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRM3P20309 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRM3P20309 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CHRM3P20309 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRM3P20309 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRM3P20309 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CHRM3P20309 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRM3P20309 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CHRM3P20309 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.52■□□□□ 0.24
CHRM3P20309 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRM3P20309 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.52■□□□□ 0.24
CHRM3P20309 AL513480.1-201ENST00000451731 511 ntBASIC16.52■□□□□ 0.24
CHRM3P20309 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.52■□□□□ 0.24
CHRM3P20309 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRM3P20309 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.52■□□□□ 0.24
CHRM3P20309 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRM3P20309 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRM3P20309 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRM3P20309 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRM3P20309 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.52■□□□□ 0.24
CHRM3P20309 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRM3P20309 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRM3P20309 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRM3P20309 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRM3P20309 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHRM3P20309 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHRM3P20309 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.52■□□□□ 0.23
CHRM3P20309 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms