Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MT-ND3P03897 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.96■□□□□ 0.31
MT-ND3P03897 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.96■□□□□ 0.31
MT-ND3P03897 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MT-ND3P03897 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.96■□□□□ 0.31
MT-ND3P03897 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MT-ND3P03897 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MT-ND3P03897 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.96■□□□□ 0.3
MT-ND3P03897 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
MT-ND3P03897 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.96■□□□□ 0.3
MT-ND3P03897 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
MT-ND3P03897 IL9RP2-201ENST00000423948 1312 ntBASIC16.96■□□□□ 0.3
MT-ND3P03897 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.96■□□□□ 0.3
MT-ND3P03897 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.95■□□□□ 0.3
MT-ND3P03897 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 AC024909.3-201ENST00000611513 2257 ntBASIC16.95■□□□□ 0.3
MT-ND3P03897 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
MT-ND3P03897 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
MT-ND3P03897 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
MT-ND3P03897 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
MT-ND3P03897 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.95■□□□□ 0.3
MT-ND3P03897 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.95■□□□□ 0.3
MT-ND3P03897 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.95■□□□□ 0.3
MT-ND3P03897 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.95■□□□□ 0.3
MT-ND3P03897 ABCD1P5-201ENST00000445663 754 ntBASIC16.95■□□□□ 0.3
MT-ND3P03897 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.95■□□□□ 0.3
MT-ND3P03897 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
MT-ND3P03897 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.95■□□□□ 0.3
MT-ND3P03897 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.95■□□□□ 0.3
MT-ND3P03897 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.95■□□□□ 0.3
MT-ND3P03897 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
MT-ND3P03897 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-ND3P03897 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-ND3P03897 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-ND3P03897 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-ND3P03897 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-ND3P03897 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.94■□□□□ 0.3
MT-ND3P03897 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MT-ND3P03897 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.94■□□□□ 0.3
MT-ND3P03897 AC018712.1-201ENST00000455767 687 ntBASIC16.94■□□□□ 0.3
MT-ND3P03897 RNA5SP419-201ENST00000515908 135 ntBASIC16.94■□□□□ 0.3
MT-ND3P03897 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MT-ND3P03897 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-ND3P03897 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-ND3P03897 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-ND3P03897 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.94■□□□□ 0.3
MT-ND3P03897 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MT-ND3P03897 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
MT-ND3P03897 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-ND3P03897 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MT-ND3P03897 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MT-ND3P03897 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-ND3P03897 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.94■□□□□ 0.3
MT-ND3P03897 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
MT-ND3P03897 AP005117.1-201ENST00000584346 1413 ntBASIC16.94■□□□□ 0.3
MT-ND3P03897 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MT-ND3P03897 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MT-ND3P03897 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-ND3P03897 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-ND3P03897 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-ND3P03897 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-ND3P03897 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MT-ND3P03897 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
MT-ND3P03897 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
MT-ND3P03897 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms