Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
APOA1P02647 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
APOA1P02647 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
APOA1P02647 PPT1-215ENST00000641471 2368 ntBASIC14.83□□□□□ -0.03
APOA1P02647 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.83□□□□□ -0.03
APOA1P02647 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOA1P02647 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.83□□□□□ -0.04
APOA1P02647 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APOA1P02647 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOA1P02647 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.04
APOA1P02647 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOA1P02647 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
APOA1P02647 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.83□□□□□ -0.04
APOA1P02647 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
APOA1P02647 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOA1P02647 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.83□□□□□ -0.04
APOA1P02647 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOA1P02647 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.83□□□□□ -0.04
APOA1P02647 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.83□□□□□ -0.04
APOA1P02647 NEK4P2-201ENST00000580004 1012 ntBASIC14.83□□□□□ -0.04
APOA1P02647 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.83□□□□□ -0.04
APOA1P02647 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.83□□□□□ -0.04
APOA1P02647 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APOA1P02647 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.83□□□□□ -0.04
APOA1P02647 C8orf49-201ENST00000525043 1968 ntBASIC14.83□□□□□ -0.04
APOA1P02647 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
APOA1P02647 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOA1P02647 AL359258.3-201ENST00000622910 2331 ntBASIC14.83□□□□□ -0.04
APOA1P02647 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
APOA1P02647 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOA1P02647 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
APOA1P02647 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOA1P02647 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOA1P02647 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APOA1P02647 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.83□□□□□ -0.04
APOA1P02647 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.83□□□□□ -0.04
APOA1P02647 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APOA1P02647 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOA1P02647 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOA1P02647 AC007292.2-201ENST00000593524 1812 ntBASIC14.82□□□□□ -0.04
APOA1P02647 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
APOA1P02647 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA1P02647 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.82□□□□□ -0.04
APOA1P02647 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA1P02647 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA1P02647 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.82□□□□□ -0.04
APOA1P02647 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA1P02647 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA1P02647 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.82□□□□□ -0.04
APOA1P02647 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA1P02647 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 FAM197Y4-202ENST00000622692 608 ntBASIC14.82□□□□□ -0.04
APOA1P02647 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 TUBB8P12-201ENST00000308911 1335 ntBASIC14.82□□□□□ -0.04
APOA1P02647 TUBB7P-202ENST00000428444 1305 ntBASIC14.82□□□□□ -0.04
APOA1P02647 TUBB8P7-204ENST00000567960 1332 ntBASIC14.82□□□□□ -0.04
APOA1P02647 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
APOA1P02647 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
APOA1P02647 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.82□□□□□ -0.04
APOA1P02647 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.82□□□□□ -0.04
APOA1P02647 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA1P02647 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.82□□□□□ -0.04
APOA1P02647 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
APOA1P02647 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
APOA1P02647 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.81□□□□□ -0.04
APOA1P02647 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.81□□□□□ -0.04
APOA1P02647 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
APOA1P02647 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.81□□□□□ -0.04
APOA1P02647 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APOA1P02647 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms