Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
MT-CO1P00395 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.99■□□□□ 0.31
MT-CO1P00395 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.99■□□□□ 0.31
MT-CO1P00395 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.99■□□□□ 0.31
MT-CO1P00395 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 AC243562.1-201ENST00000560672 389 ntBASIC16.99■□□□□ 0.31
MT-CO1P00395 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
MT-CO1P00395 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
MT-CO1P00395 AC027612.4-201ENST00000605371 583 ntBASIC16.99■□□□□ 0.31
MT-CO1P00395 AC026120.1-201ENST00000611536 926 ntBASIC16.99■□□□□ 0.31
MT-CO1P00395 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MT-CO1P00395 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-CO1P00395 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
MT-CO1P00395 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-CO1P00395 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.99■□□□□ 0.31
MT-CO1P00395 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-CO1P00395 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.99■□□□□ 0.31
MT-CO1P00395 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MT-CO1P00395 AC008741.2-201ENST00000612792 3115 ntBASIC16.99■□□□□ 0.31
MT-CO1P00395 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MT-CO1P00395 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MT-CO1P00395 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-CO1P00395 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 PCDH8P1-201ENST00000428983 2773 ntBASIC16.98■□□□□ 0.31
MT-CO1P00395 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MT-CO1P00395 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 AP000344.2-201ENST00000512987 629 ntBASIC16.98■□□□□ 0.31
MT-CO1P00395 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.98■□□□□ 0.31
MT-CO1P00395 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-CO1P00395 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
MT-CO1P00395 AL135744.1-201ENST00000565098 629 ntBASIC16.98■□□□□ 0.31
MT-CO1P00395 RARRES2P8-201ENST00000566335 367 ntBASIC16.98■□□□□ 0.31
MT-CO1P00395 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.98■□□□□ 0.31
MT-CO1P00395 MIR3909-201ENST00000579518 119 ntBASIC16.98■□□□□ 0.31
MT-CO1P00395 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-CO1P00395 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-CO1P00395 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.98■□□□□ 0.31
MT-CO1P00395 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-CO1P00395 AL161645.1-201ENST00000622716 1255 ntBASIC16.98■□□□□ 0.31
MT-CO1P00395 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
MT-CO1P00395 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
MT-CO1P00395 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.98■□□□□ 0.31
MT-CO1P00395 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 AL603756.1-201ENST00000606511 2163 ntBASIC16.98■□□□□ 0.31
MT-CO1P00395 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MT-CO1P00395 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
MT-CO1P00395 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.97■□□□□ 0.31
MT-CO1P00395 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
MT-CO1P00395 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.97■□□□□ 0.31
MT-CO1P00395 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MT-CO1P00395 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms