Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
GPC4O75487 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 AL662844.4-201ENST00000606367 2838 ntBASIC16.67■□□□□ 0.26
GPC4O75487 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
GPC4O75487 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.67■□□□□ 0.26
GPC4O75487 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GPC4O75487 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.67■□□□□ 0.26
GPC4O75487 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.67■□□□□ 0.26
GPC4O75487 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.67■□□□□ 0.26
GPC4O75487 REXO1L3P-201ENST00000622202 1288 ntBASIC16.67■□□□□ 0.26
GPC4O75487 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.67■□□□□ 0.26
GPC4O75487 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.67■□□□□ 0.26
GPC4O75487 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GPC4O75487 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.67■□□□□ 0.26
GPC4O75487 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 AC026691.1-201ENST00000602502 2017 ntBASIC16.67■□□□□ 0.26
GPC4O75487 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GPC4O75487 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
GPC4O75487 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.66■□□□□ 0.26
GPC4O75487 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GPC4O75487 AL021920.2-201ENST00000624828 1351 ntBASIC16.66■□□□□ 0.26
GPC4O75487 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.66■□□□□ 0.26
GPC4O75487 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.66■□□□□ 0.26
GPC4O75487 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
GPC4O75487 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.66■□□□□ 0.26
GPC4O75487 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.66■□□□□ 0.26
GPC4O75487 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.66■□□□□ 0.26
GPC4O75487 AC108073.2-201ENST00000464002 357 ntBASIC16.66■□□□□ 0.26
GPC4O75487 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.66■□□□□ 0.26
GPC4O75487 UNC93B6-202ENST00000528242 690 ntBASIC16.66■□□□□ 0.26
GPC4O75487 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 OR7E47P-204ENST00000575924 449 ntBASIC16.66■□□□□ 0.26
GPC4O75487 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 KRT8P49-201ENST00000604166 1432 ntBASIC16.66■□□□□ 0.26
GPC4O75487 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.66■□□□□ 0.26
GPC4O75487 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.66■□□□□ 0.26
GPC4O75487 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.66■□□□□ 0.26
GPC4O75487 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 PCDHB17P-201ENST00000539533 2393 ntBASIC16.66■□□□□ 0.26
GPC4O75487 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
GPC4O75487 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.66■□□□□ 0.26
GPC4O75487 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GPC4O75487 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.66■□□□□ 0.26
GPC4O75487 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPC4O75487 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.65■□□□□ 0.26
GPC4O75487 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GPC4O75487 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC4O75487 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC4O75487 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.65■□□□□ 0.26
GPC4O75487 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC4O75487 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC4O75487 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC4O75487 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC4O75487 RNA5SP415-201ENST00000517246 115 ntBASIC16.65■□□□□ 0.26
GPC4O75487 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
GPC4O75487 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.65■□□□□ 0.26
GPC4O75487 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GPC4O75487 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.65■□□□□ 0.26
GPC4O75487 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.65■□□□□ 0.26
GPC4O75487 AC004790.2-201ENST00000623588 572 ntBASIC16.65■□□□□ 0.26
GPC4O75487 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPC4O75487 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.65■□□□□ 0.26
GPC4O75487 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.65■□□□□ 0.26
GPC4O75487 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms